![]() |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OPUNC05G23850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 380aa MW: 40391.6 Da PI: 9.6972 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.8 | 3.6e-21 | 245 | 307 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkre+rkq+NRe+ArrsR+RK+ae+e L++ v++L aeN++L++e+++l++ ++kl+ e+ OPUNC05G23850.1 245 ERELKREKRKQSNRESARRSRLRKQAETEDLATQVESLAAENTSLRSEISRLSESSEKLRLEN 307 89*********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.7E-30 | 1 | 93 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 3.0E-16 | 242 | 304 | No hit | No description |
Pfam | PF00170 | 9.4E-20 | 245 | 307 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 5.9E-21 | 245 | 309 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.15 | 247 | 310 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-11 | 248 | 303 | No hit | No description |
CDD | cd14702 | 3.37E-22 | 250 | 298 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 252 | 267 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 380 aa Download sequence Send to blast |
MAHDEAVANQ KTGKTASPPK EQPTPCPFPD WSAVQAYYGP GVLPPTYFAP AIAPGHAPPP 60 YMWGPQPIMP PPFGTPYAAM YPHGGAYPHP LMPMMANPLS MEPAKSASSK EKGSNKKLKE 120 VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME 180 NALPPSHILG STAVLPNHCF PAQVIRPSAT NVANSRALGT PISPPPGVIV PTHTGVSTEL 240 LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLAAENTSLR SEISRLSESS 300 EKLRLENSAL MGKLKGPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KMSVRHTEHA 360 EPKLRQLLGS SPATDVVAAS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 261 | 267 | RRSRLRK |
2 | 261 | 268 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AK065440 | 0.0 | AK065440.1 Oryza sativa Japonica Group cDNA clone:J013020K21, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015640745.1 | 0.0 | PREDICTED: common plant regulatory factor 1 | ||||
TrEMBL | A0A0E0L5W8 | 0.0 | A0A0E0L5W8_ORYPU; Uncharacterized protein | ||||
STRING | BGIOSGA020389-PA | 0.0 | (Oryza sativa Indica Group) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2776 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46270.1 | 1e-38 | G-box binding factor 3 |